Andres Suarez

Generation

data <- read.table("D:/USUARIO/OneDrive/Documents/Analisis de datos/Metaboanalist/importan Features POS/composite spectra.csv", header = TRUE, sep = ",") control_data <- data[, c("m.z", "RT", "Control", "Control.1", "Control.2", "Control.3", "Control.4", "Control.5", "Control.6", "Control.7", "Control.8")] treatment_data <- data[, c("m.z", "RT", "Treatment", "Treatment.1", "Treatment.2", "Treatment.3", "Treatment.4", "Treatment.5", "Treatment.6", "Treatment.7", "Treatment.8" )] myRawData <- readMSData(control_data, mzCol = 1, rtCol = 2, intensityCol = 3) control_raw <- xcmsRaw(control_data, profmethod = "bin") control_norm <- normalize(control_raw, method = "median") control_normalized_data <- as.data.frame(control_norm) control_data_norm <- normalize(control_data[, -c(1, 2)]) treatment_data_norm <- normalize(treatment_data[, -c(1, 2)])

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